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| Registros recuperados: 31 | |
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| Albouy, Camille; Lasram, Frida Ben Rais; Velez, Laure; Guilhaumon, François; Meynard, Christine N.; Boyer, Séverine; Benestan, Laura; Mouquet, Nicolas; Douzery, Emmanuel; Aznar, Roland; Troussellier, Marc; Somot, Samuel; Leprieur, Fabien; Le Loc'H, François; Mouillot, David. |
| The FishMed database provides traits, phylogeny, current and projected species distribution of Mediterranean fishes, and associated sea surface temperature (SST) from the regional oceanic model NEMOMED8. Data for the current geographical distributions of 635 Mediterranean fish species were compiled from a published expert knowledge atlas of fishes of the northern Atlantic and the Mediterranean (FNAM) edited between 1984 and 1986 and from an updated exotic fish species list. Two future sets of projected species distributions were obtained for the middle and end of the 21st century by using an ensemble forecasting approach for 288 coastal Mediterranean fish species based on SST according to the IPPC/SRES A2 scenario implemented with the Mediterranean... |
| Tipo: Text |
Palavras-chave: Climate change; Coastal fishes; Functional diversity; Mediterranean fish species; Mediterranean Sea; NEMOMED8; Phylogenetic diversity; Species distribution models; Taxonomic diversity. |
| Ano: 2015 |
URL: https://archimer.ifremer.fr/doc/00371/48216/48341.pdf |
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| Boyé, Aurelien; Thiébaut, Éric; Grall, Jacques; Legendre, Pierre; Broudin, Caroline; Houbin, Céline; Le Garrec, Vincent; Maguer, Marion; Droual, Gabin; Gauthier, Olivier. |
| Aim β diversity and its linkages with ecosystem functioning remain poorly documented. This impedes our capacity to predict biodiversity changes and how they affect ecosystem functioning at scales relevant for conservation. Here, we address the functional implications of ongoing seafloor changes by characterizing at regional scale the taxonomic and functional α and β diversities of benthic habitats currently threatened by biotic homogenization. Location Western Europe. Methods Combining a trait‐based approach to benthic community monitoring data covering a 7‐year period and 500 km of coast, we explored the mechanisms governing community assembly in habitats associated with two types of foundation species, intertidal seagrass and subtidal maerl beds,... |
| Tipo: Text |
Palavras-chave: Beta diversity; Biotic homogenization; Broad-scale monitoring; Community assembly; Coralline algae; Ecosystem engineers; Functional diversity; Zostera marina. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00515/62688/67074.pdf |
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| Brind'Amour, Anik; Rouyer, Armelle; Martin, Jocelyne. |
| The development of ecosystem-based indicators requires the broadening of a view of the community, from fish species to all the species (macrobenthic and fish) correctly captured by a given sampling gear. Many scientific surveys already have such integrated databases. The present note aims to demonstrate that existing databases, herein from dedicated coastal nursery surveys, are actually underexploited. Such databases contain information on non-commercial taxa, which could greatly improve our knowledge on the organisation and functioning of coastal ecosystems. Using two datasets, a "complete" dataset composed of commercial and not-commercial epibenthic trawled species (fish and invertebrate) and a "subset" dataset characterized by commercial and routinely... |
| Tipo: Text |
Palavras-chave: Nursery grounds; Functional diversity; Fish community; Coastal surveys; Beam trawl; Bay of Biscay. |
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-6507.pdf |
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| Chao, Anne; Chiu, Chun-huo; Villéger, Sébastien; Sun, I-fang; Thorn, Simon; Lin, Yi-ching; Chiang, Jyh-min; Sherwin, William B.. |
| Based on the framework of attribute diversity (a generalization of Hill numbers of order q), we develop a class of functional diversity measures sensitive not only to species abundances but also to trait‐based species‐pairwise functional distances. The new method refines and improves on the conventional species‐equivalent approach in three areas: (1) the conventional method often gives similar values (close to unity) to assemblages with contrasting levels of functional diversity; (2) when a distance metric is unbounded, the conventional functional diversity depends on the presence/absence of other assemblages in the study; (3) in partitioning functional gamma diversity into alpha and beta components, the conventional gamma is sometimes less than alpha. To... |
| Tipo: Text |
Palavras-chave: Attribute diversity; Diversity decomposition; Functional (dis)similarity; Functional beta diversity; Functional diversity; Hill numbers; Quadratic entropy; Species diversity; Species traits; Trait diversity. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00489/60082/63408.pdf |
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| Chust, Guillem; Vogt, Meike; Benedetti, Fabio; Nakov, Teofil; Villeger, Sebastien; Aubert, Anais; Vallina, Sergio M.; Righetti, Damiano; Not, Fabrice; Biard, Tristan; Bittner, Lucie; Benoiston, Anne-sophie; Guidi, Lionel; Villarino, Ernesto; Gaborit, Charlie; Cornils, Astrid; Buttay, Lucie; Irisson, Jean-olivier; Chiarello, Marlene; Vallim, Alessandra L.; Blanco-bercial, Leocadio; Basconi, Laura; Guilhaumon, Francois; Ayata, Sakina-dorothee. |
| With global climate change altering marine ecosystems, research on plankton ecology is likely to navigate uncharted seas. Yet, a staggering wealth of new plankton observations, integrated with recent advances in marine ecosystem modeling, may shed light on marine ecosystem structure and functioning. A EuroMarine foresight workshop on the “Impact of climate change on the distribution of plankton functional and phylogenetic diversity” (PlankDiv) identified five grand challenges for future plankton diversity and macroecology research: (1) What can we learn about plankton communities from the new wealth of high-throughput “omics” data? (2) What is the link between plankton diversity and ecosystem function? (3) How can species distribution models be adapted to... |
| Tipo: Text |
Palavras-chave: Plankton; Macroecology; Species distribution; Functional diversity; Climate change; Habitat modeling. |
| Ano: 2017 |
URL: https://archimer.ifremer.fr/doc/00625/73739/74755.pdf |
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| Escalas, Arthur; Hale, Lauren; Voordeckers, James W.; Yang, Yunfeng; Firestone, Mary K.; Alvarez‐cohen, Lisa; Zhou, Jizhong. |
| Functional diversity is increasingly recognized by microbial ecologists as the essential link between biodiversity patterns and ecosystem functioning, determining the trophic relationships and interactions between microorganisms, their participation in biogeochemical cycles, and their responses to environmental changes. Consequently, its definition and quantification have practical and theoretical implications. In this opinion paper, we present a synthesis on the concept of microbial functional diversity from its definition to its application. Initially, we revisit to the original definition of functional diversity, highlighting two fundamental aspects, the ecological unit under study and the functional traits used to characterize it. Then, we discuss how... |
| Tipo: Text |
Palavras-chave: Functional diversity; Functional traits; Microbial communities; Theoretical frameworks of diversity; Trait-based ecology. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00584/69631/67487.pdf |
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| Fernandes,Camila Cesário; Kishi,Luciano Takeshi; Lopes,Erica Mendes; Omori,Wellington Pine; Souza,Jackson Antonio Marcondes de; Alves,Lucia Maria Carareto; Lemos,Eliana Gertrudes de Macedo. |
| Abstract Human activities on the Earth's surface change the landscape of natural ecosystems. Mining practices are one of the most severe human activities, drastically altering the chemical, physical and biological properties of the soil environment. Bacterial communities in soil play an important role in the maintenance of ecological relationships. This work shows bacterial diversity, metabolic repertoire and physiological behavior in five ecosystems samples with different levels of impact. These ecosystems belong to a historical area in Iron Quadrangle, Minas Gerais, Brazil, which suffered mining activities until its total depletion without recovery since today. The results revealed Proteobacteria as the most predominant phylum followed by Acidobacteria,... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Iron mine; Bacterial diversity; Functional diversity; Brazilian soils. |
| Ano: 2018 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1517-83822018000300489 |
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| Hadj-hammou, Jeneen; Mouillot, David; Graham, Nicholas A. J.. |
| The response-and-effect framework is a trait-based approach that seeks to break down the mechanistic links between ecosystem disturbances, species' traits, and ecosystem processes. We apply this framework to a review of the literature on coral reef fish traits, in order to illustrate the research landscape and structure a path forward for the field. Traits were categorized into five broad groupings: behavioral, life history, morphological, diet, and physiological. Overall, there are fewer studies linking effect traits to ecosystem processes (number of papers on herbivory, n = 14; predation, n = 12; bioerosion, n = 2; nutrient cycling, n = 0) than there are linking response traits to disturbances (climate change, n = 26; fishing, n = 20; pollution, n = 4).... |
| Tipo: Text |
Palavras-chave: Ecosystem processes; Environmental disturbances; Functional diversity; Coral reef ecology; Ecosystem function; Trait-based ecology; Systematic review. |
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00688/79975/82919.pdf |
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| Jeanbille, Mathilde; Gury, Jérôme; Duran, Robert; Tronczynski, Jacek; Ghiglione, Jean-françois; Agogué, Hélène; Saïd, Olfa Ben; Taïb, Najwa; Debroas, Didier; Garnier, Cédric; Auguet, Jean-christophe. |
| Benthic microorganisms are key players in the recycling of organic matter and recalcitrant compounds such as polyaromatic hydrocarbons (PAHs) in coastal sediments. Despite their ecological importance, the response of microbial communities to chronic PAH pollution, one of the major threats to coastal ecosystems, has received very little attention. In one of the largest surveys performed so far on coastal sediments, the diversity and composition of microbial communities inhabiting both chronically contaminated and non-contaminated coastal sediments were investigated using high-throughput sequencing on the 18S and 16S rRNA genes. Prokaryotic alpha-diversity showed significant association with salinity, temperature, and organic carbon content. The effect of... |
| Tipo: Text |
Palavras-chave: Microbial communities; PAH; Chronic contamination; Coastal sediment; Functional diversity. |
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00347/45854/45522.pdf |
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| Koeck, Barbara; Tessier, Anne; Brind'Amour, Anik; Pastor, Jeremy; Bijaoui, Benjamin; Dalias, Nicolas; Astruch, Patrick; Saragoni, Gilles; Lenfant, Philippe. |
| In the context of growing anthropogenic disturbances that deeply alter marine coastal ecosystems, various management tools are used to protect biodiversity, such as fishing gear limitations, fishing quotas, protected areas or the creation of artificial reefs (ARs). In contrast to the other management tools, ARs require a modification of natural habitats. We used underwater visual censuses to investigate the effect of habitat modification on the structure of fish communities by comparing a natural reef (NR) to ARs with different habitat complexity. Different fish assemblage descriptors were used to assess species- and functional- and community-level aspects of the assemblages. ARs were rapidly colonized by adult fishes and presented community compositions... |
| Tipo: Text |
Palavras-chave: Ecological niche; Fish community; Fisheries management; Functional diversity; Gulf of Lion; Habitat complexity; Mediterranean Sea; Underwater visual census. |
| Ano: 2014 |
URL: https://archimer.ifremer.fr/doc/00189/30029/28514.pdf |
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| Legras, Gaëlle; Loiseau, Nicolas; Gaertner, Jean-claude; Poggiale, J-c.; Gaertner-mazouni, N.. |
| The impact of the variation of the number of functional traits on functional diversity assessment is still poorly known. Although the covariation between these two parameters may be desirable in some situations (e.g. if adding functional traits provides relevant new functional information), it may also result from mathematical artefacts and lead to misinterpretation of the results obtained. Here, we have tested the behaviour of a set of nine indices widely used for assessing the three main components of functional diversity (i.e. functional richness, evenness and divergence), according to the variation in the number of functional traits. We found that the number of functional traits may strongly impact the values of most of the indices considered, whatever... |
| Tipo: Text |
Palavras-chave: Functional traits; Dissimilarity metric; Functional diversity; Index sensitivity; Trend analysis. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00503/61438/65561.pdf |
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| Malysz,Marcelo; Müller,Sandra Cristina; Milesi,Silvia Vendruscolo; Santos,Anita Stival dos; Overbeck,Gerhard Ernst. |
| ABSTRACT A functional perspective of tree communities is helpful for understanding forest dynamics, especially vegetation recovery after other land uses. Knowledge about ecological filters and survival strategies of trees are also important for the restoration of degraded areas. This study aimed to evaluate the functional composition and structure of adult and regenerative components of natural Araucaria forests, Araucaria plantations and plantations of exotic Pinus in subtropical southern Brazil. Differences in functional diversity and functional richness, and in community weighted mean trait values, including leaf traits and reproductive traits, were analyzed. RLQ analysis was used to assess the association between community structure, plant traits and... |
| Tipo: Info:eu-repo/semantics/article |
Palavras-chave: Araucaria angustifolia; Atlantic Forest; Forest dynamics; Functional diversity; Functional patterns; Pinus sp.; Succession; Tree plantations. |
| Ano: 2019 |
URL: http://www.scielo.br/scielo.php?script=sci_arttext&pid=S0102-33062019000400777 |
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| Matos, Gabriel Machado; Schmitt, Paulina; Barreto, Caire; Farias, Natanael Dantas; Toledo-silva, Guilherme; Guzman, Fanny; Destoumieux Garzon, Delphine; Perazzolo, Luciane Maria; Rosa, Rafael Diego. |
| Anti-lipopolysaccharide factors (ALFs) are antimicrobial peptides with a central β-hairpin structure able to bind to microbial components. Mining sequence databases for ALFs allowed us to show the remarkable diversity of ALF sequences in shrimp. We found at least seven members of the ALF family (Groups A to G), including two novel Groups (F and G), all of which are encoded by different loci with conserved gene organization. Phylogenetic analyses revealed that gene expansion and subsequent diversification of the ALF family occurred in crustaceans before shrimp speciation occurred. The transcriptional profile of ALFs was compared in terms of tissue distribution, response to two pathogens and during shrimp development in Litopenaeus vannamei, the most... |
| Tipo: Text |
Palavras-chave: Host defense peptide; Antimicrobial peptide; Anti-LPS factor; Hostmicrobe relationship; Functional diversity; Invertebrate immunity; Crustacean; Antimicrobial activity. |
| Ano: 2018 |
URL: https://archimer.ifremer.fr/doc/00464/57523/59711.pdf |
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| Mclean, Matthew; Auber, Arnaud; Graham, Nicholas A J; Houk, Peter; Villéger, Sébastien; Violle, Cyrille; Thuiller, Wilfried; Wilson, Shaun K.; Mouillot, David. |
| ‘Functional’ diversity is believed to influence ecosystem dynamics through links between organismal traits and ecosystem processes. Theory predicts that key traits and high trait redundancy – large species richness and abundance supporting the same traits – can buffer communities against environmental disturbances. While experiments and data from simple ecological systems lend support, large‐scale evidence from diverse, natural systems under major disturbance is lacking. Here, using long‐term data from both temperate (English Channel) and tropical (Seychelles Islands) fishes, we show that sensitivity to disturbance depends on communities’ initial trait structure and initial trait redundancy. In both ecosystems, we found that increasing dominance by... |
| Tipo: Text |
Palavras-chave: Climate change; Coral reefs; Diversity stability; Ecological traits; Ecosystem functioning; English Channel; Functional diversity. |
| Ano: 2019 |
URL: https://archimer.ifremer.fr/doc/00490/60184/63525.pdf |
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| Registros recuperados: 31 | |
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